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TubercuList - Mycobacterium Tuberculosis Database

Type

Dataset

Link

http://tuberculist.epfl.ch/

Source

Ckan.net

The most complete H37Rv genome, manually annotated.

Different from the french href="http://genolist.pasteur.fr/TubercuList/" target="_blank" rel="nofollow">http://genolist.pasteur.fr/TubercuList/ which is not up-to-date.

However, both genomes are much better than the one in UniProt, which is also mixed with CD1551, according to their help desk.

Swiss TubercuList in numbers:

    - 4,411,532 bp of DNA sequence representing the whole Mycobacterium tuberculosis chromosome (strain H37Rv, EMBL/GenBank/DDBJ entry AL123456)
    - 4,011 protein genes
    - 7 pseudogenes
    - 45 tRNA genes
    - 3 rRNA genes
    - 2 stable RNA genes
    - 9 sRNA genes
    - Gene density: 1,099 bases per gene
    - Average gene length: 1,004 bases per gene
    - Protein coding (CDS) bases: 4,028,175
    - Protein coding percentage: 91.3%
    - GC percentage: 65.61 %